Scedule: Bio-networks workshop, Montauk 2005

Institute for Theory of Strongly Correlated and Complex Systems

International Workshop:

Complex biomolecular networks:
structure, evolution, and function

September 6-9, 2005

Montauk Yacht Club,
Long Island, New York

Schedule in PDF version

All talks are presented at the Vanderbilt Room

Monday, September 5th

Arrival at Conference Location
Dinner Available from 7:00pm to 9:00pm in the Lobby Patio

Tuesday, September 6th

Date	Time		Speaker		Title
(AM)	Continental Breakfast-Vanderbilt Room ( 7:45am-8:45am )
	8:45-9:00	Sergei Maslov		Opening remarks
	9:00-9:50	Wen-Hsiung Li		Protein Function, Connectivity, Duplicability and Dispensability
	9:55-10:45	Andreas Wagner		The evolvability of robustness in cellular circuits
	10:50-11:05	coffee break
	11:05-11:55	Mark Gerstein		Computational Proteins: Understanding Protein Function on a Genome-scale using Networks
Lunch-Lobby Patio ( 12:00pm-1:00pm )
(PM)	1:00-1:50		Yuri Wolf		Unifying measures of gene function and evolution
	1:55-2:45		Itai Yanai		An evolutionary approach to the study of developmental networks
	2:50-3:10		coffee break
	3:10-4:00		Shamil Sunyaev		Lessons from a small scale analysis of protein networks:relating evolution to function and pgenotype
	16:00-16:55		I.King Jordan	Evolution of mammalian gene sequence and gene expression networks
	5:00-5:30		Mohan Madam Babu	Genomic analysis reveals rapid evolution of transcriptional regulatory networks in prokaryotes
Dinner-Il Mare Ristorante ( 6:30pm-8:30pm )

Wednesday, September 7th

Date	Time	Speaker	Title
	Continental Breakfast-Vanderbilt Room ( 8:00am-9:00am )
(AM)	9:00-9:50	Eugene Shakhnovich	Evolution or Physics? Scale-free networks in biomolecular structure and interactions
	9:55-10:45	Ron Shamir	Modeling, inference and evolution in bionetworks
	10:50-11:05	coffee break
	11:00-11:55	Fritz Roth	Analysis of I) S. cerevisiae synthetic-lethal interactions and II) a high-throughput experimental map of protein interaction in humans
Lunch-Lobby Patio ( 12:00pm-1:00pm )
(PM)	1:00-1:50	Reka Albert	Modeling a the Drosophila segment polarity genes: continuous, synchronous Boolean, and asynchronous Boolean approaches
	1:55-2:45	Nicholas Ingolia	Topology and Robustness in Drosophila Segment Polarity
	2:50-3:10	coffee break
	3:10-4:00	Denis Vitkup	Context-based correlation in the context of cellular networks
	4:05-4:55	Stefan Bornhold	Reliable gene regulation: Reproducible dynamics from noisy circuits
	5:00-5:30	Susan Atlas	The 'dressed protein': reconstructing regulatory pathways in context
	5:30-6:00	Claire Christensen	Large-Scale Inference and Graph- Theoretical Analysis of Gene-Regulatory Networks in the Bacterium B. subtilis
Dinner-Il Mare Ristorante ( 6:30pm-8:30pm )

Thursday, September 8th

Date	Time	Speaker	Title
(AM)	Continental Breakfast-Vanderbilt Room ( 8:00am-9:00am )
	9:00-9:50	Sarah A. Teichmann	Evolution of Protein Interactions in Complexes and Networks
	9:55-10:45	Erik van Nimwengen	Scaling laws in the functional content of genomes: Evidence of universal evolutionary constants?
	10:50-11:05	coffee break
	11:05-11:55	Leonid Mirny	What can structure of the metabolic network tell us about function and evolution?
Lunch-Lobby Patio ( 12:00pm-1:00pm )
(PM)	1:00-1:50	Kris Gunsalus	Predictive models of molecular machines involved in C. elegans early embryogenesis.
	1:55-2:45	Andrey Rzhetsky	Distributed thinking about molecular networks in biomedical communities
	2:50-3:10	coffee break
	3:10-4:00	Ilya Mazo	Molecular Networks in Mammals: Extraction from Literature and Pathway Analysis
	16:00-16:55	Iaroslav Ispolatov	Dimers in evolution and topology of ptotein-protein interaction networks
Dinner-Il Mare Ristorante ( 6:30pm-8:30pm )

Friday, September 9th

Date	Time	Speaker	Title
(AM)	Continental Breakfast-Vanderbilt Room ( 8:00am-9:00am ) Boxed lunches would be available at Vanderbilt Room 7:30am-9:30am
Departure